Insertion junction: CLIP2.039967_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039967
Chromosome:chromosome 1
Location:7579577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g053200 (1 of 1) PTHR12415:SF0 - TYROSYL-DNA PHOSPHODIESTERASE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCGACGGCTTCACCACCTGTGCTGACCATTTCCCACCTGTGACCTA
Internal bar code:TAAGTCTTGTACTTGACGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACCACTGCTGCTGTGTG
Suggested primer 2:ATGCATCAACCGCACCTGTA