Insertion junction: CLIP2.039970_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039970
Chromosome:chromosome 11
Location:4373607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482900 RAB20,RAB18C,RABC3 Small Rab-related GTPase; (1 of 3) K07910 - Ras-related protein Rab-18 (RAB18) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTGGTAGGCGATAGTGGCGTAGGTAAAAGCTGCATCTTGACGCGCT
Internal bar code:GCTGGGTGAGCGACATCCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1402
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACTGTCAACTTGCAGC
Suggested primer 2:TGCAACGTAACCAAACAGCG