Insertion junction: CLIP2.039972_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039972
Chromosome:chromosome 1
Location:5202868
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g036350 PMA1 (1 of 5) K01537 - Ca2+-transporting ATPase (E3.6.3.8); Related to plasma membrane P-type and chloroplast type calcium ATPases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGGAGAGGAGGGAGAGGAGGGAGAGGAGGGAGAGGAGGGAGAGGAG
Internal bar code:GTGAAAGTGGTACTTCTCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGATGGCATTGTGCTAG
Suggested primer 2:ATCTCGTTGAACACCTGCGT