Insertion junction: CLIP2.039974_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039974
Chromosome:chromosome 3
Location:8615443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGTCGCCGCTGACACTTCTTTGTGCGCCCCTCTCTTGCTCTCCCTT
Internal bar code:GTTCAATACCTCGAGGATTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTTCACTGACGAGGGT
Suggested primer 2:CGCGGCCATAAGAAACTTCG