Insertion junction: CLIP2.039974_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039974
Chromosome:chromosome 13
Location:4469242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCCCGCGTCAACCGTTTGCAGCTGTGCCGCTCGCCCCTGTGGCTTGT
Internal bar code:CCACCTATCAGAGTTGGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTGTGTGTGTGTGTG
Suggested primer 2:ATCTCAGGCAACAGCAGTCC