Insertion junction: CLIP2.039974_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039974
Chromosome:chromosome 13
Location:4469245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602750 (1 of 5) PTHR32467:SF15 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGTTTTGCTGCAGTTGCACGCACCAGAGCAAGCCACTACCGTTACCCC
Internal bar code:CCACCTATCAGAGTTGGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCAGGCAACAGCAGTCC
Suggested primer 2:GGTGTGTGTGTGTGTGTGTG