Insertion junction: CLIP2.039984_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039984
Chromosome:chromosome 3
Location:3619130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g168150 (1 of 2) PF00069//PF12796 - Protein kinase domain (Pkinase) // Ankyrin repeats (3 copies) (Ank_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGAAACCTGGTAGGTTGCGGCTGCGCAGGAATCCGCGGCTGTACTGC
Internal bar code:TCTGCGGATAGACTAGGTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:966
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTCTCGGGACAAGGTC
Suggested primer 2:TCCCTCTCTCCTCTTGTCCG