Insertion junction: CLIP2.039987_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039987
Chromosome:chromosome 6
Location:8018873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304850 (1 of 1) PF04424 - Protein of unknown function (DUF544) (DUF544) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTACGAACAGACGGGCGCAGCTGTACCCGCCCGCCGGTGCACACGTCC
Internal bar code:CCCTCCGGTTAGTAGCTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:147
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGAATGGGAGGCAT
Suggested primer 2:TTGCCCAAGCGGACATACAT