Insertion junction: CLIP2.039989_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039989
Chromosome:chromosome 16
Location:409387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693600 ISG-C4,ISG4,FAP137 Hydroxyproline-rich Flagellar Associated Protein137; (1 of 1) 2.7.11.1//2.7.11.18 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGA
Internal bar code:GATCGTTTGCGGCTTCAAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACGAAACCACCAGTACA
Suggested primer 2:AATGCCAGTCAGGGAAGAGC