Insertion junction: CLIP2.039992_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039992
Chromosome:chromosome 16
Location:3098803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664750 (1 of 1) IPR000225//IPR016024//IPR021133 - Armadillo // Armadillo-type fold // HEAT, type 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGTTGGGGGCTGGCTTCCGGCACATGTGACATGTGCGGTGGCAGGC
Internal bar code:AGCGATTGGACCAGTTATGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACACGTACCTCTGCAG
Suggested primer 2:CAATTTCTTGTGGCGCGGAG