Insertion junction: CLIP2.039998_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039998
Chromosome:chromosome 13
Location:4052194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCTCAGTAAGAAGCTGGAGCATCGGAGGAGCGCCCCCAGCAGCGCCA
Internal bar code:TTGAACACTTGGTGAATCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2899
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGACCTTGCTGATGAACT
Suggested primer 2:TCGAGAAGGGTACGTAGGCA