Insertion junction: CLIP2.040001_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040001
Chromosome:chromosome 4
Location:1558386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213400 SUB7 (1 of 1) PTHR10795//PTHR10795:SF419 - PROPROTEIN CONVERTASE SUBTILISIN/KEXIN // SUBFAMILY NOT NAMED; Subtilisin-like protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACGGTACAGGTAAGGAAGACGCGGGTGGGTGCATGGGACACGGGACA
Internal bar code:CTTCGCTAGCTTATCCATGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AACTAACGGCTCTGCTGCTT
Suggested primer 2:TTGATCTGGAGGGGGAGGAG