Insertion junction: CLIP2.040004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040004
Chromosome:chromosome 14
Location:3166476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628702 (1 of 1) PF11919 - Domain of unknown function (DUF3437) (DUF3437) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTTCGGGGATGGGGGCTATTGTCGCGTGCCACTACGTTGTCAAGCAT
Internal bar code:TATTAAATCCGGTCTCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCACACACACACATACA
Suggested primer 2:GACTTCGGAATTCGCGCTTC