Insertion junction: CLIP2.040008_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040008
Chromosome:chromosome 12
Location:9355965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541750 ZPD1 (1 of 1) 1.3.99.30 - Phytoene desaturase (3,4-didehydrolycopene-forming) / 5-step phytoene desaturase; Putative zeta-phytoene desaturase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTTGCGCTGGTGAAGCCCAAGGATCGGGAAGGACTGAGGCAGTCTTT
Internal bar code:GGATTTTTATTGTGGCTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCAAGGAAGTCCAGCGA
Suggested primer 2:CCAGAGCCGAGCTAGACATG