Insertion junction: CLIP2.040010_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040010
Chromosome:chromosome 12
Location:9512188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540350 RCD2 Rcd1-like protein; (1 of 2) K12606 - CCR4-NOT transcription complex subunit 9 (RCD1, CNOT9, CAF40) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGAATCGAACGAGCCAGGGGCGGCACAGCGCATGTGTGTTTTCTGTC
Internal bar code:TTGGGTTAGTATAGACGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TAATGAAGGTGGCCACGGTC
Suggested primer 2:AAATGGACGAGACGCAGGTT