Insertion junction: CLIP2.040011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040011
Chromosome:chromosome 2
Location:7920239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145550 (1 of 1) PTHR13144//PTHR13144:SF0 - TEX261 PROTEIN // PROTEIN TEX261 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGGTGGCAGTGTGTGACGGGAACAAAAGGAGAGATAGGTGGGCAGGG
Internal bar code:GGCAAACATCAGATTGCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1235
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAACAAGCCACACAACA
Suggested primer 2:GTAACGAATCGAAAGCCCGC