Insertion junction: CLIP2.040014_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040014
Chromosome:chromosome 16
Location:2089945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGGCCTGGGCTGCTGTGCGCAACGCGGGGGCTATGCGCAGCATGGC
Internal bar code:GTCTGTTAGCAGGTCAGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1193
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCTTTGTCCGTCTCCA
Suggested primer 2:GAGACTTTCCCTCACCGAGC