Insertion junction: CLIP2.040015_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040015
Chromosome:chromosome 16
Location:1671866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654600 PHC56 (1 of 71) PF12499 - Pherophorin (DUF3707); Pherophorin-chlamydomonas homolog 56 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTTTGTGTGGTGTGTGTGTGTGTGTGTTTGCTGCCGCCTGCAGTCC
Internal bar code:ATCGAGACTGAGGGTATGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3338
LEAP-Seq percent confirming:84.1584
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCAAGGCAAGCAAGGA
Suggested primer 2:TACTGACATCATCGTGGGCG