Insertion junction: CLIP2.040017_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040017
Chromosome:chromosome 3
Location:3753954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169300 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGGGCAGGAGGCCGGCGTGGGAGGGCCTGGGTTATGGAGGGGCCGT
Internal bar code:GACGGTGGTCGATCATGTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3018
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGCTCGGGAAAGACAAC
Suggested primer 2:CGTCCTGTCGCTAAGTGGTT