Insertion junction: CLIP2.040025_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040025
Chromosome:chromosome 12
Location:8201597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551801 (1 of 1) PTHR12100//PTHR12100:SF0 - SEC10 // EXOCYST COMPLEX COMPONENT 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGCAGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGTGTG
Internal bar code:CATCGGAGGGCAGCACGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCAATCACACCCTGCC
Suggested primer 2:GGCTACCCTCTCACTCCTCA