Insertion junction: CLIP2.040028_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040028
Chromosome:chromosome 16
Location:1732600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654850 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTTGACCCGCTGGATAGAGCAGCATTACATTAATCTGCCCTTGGGTA
Internal bar code:GAGGTGTGGCGGAGGGGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2531
LEAP-Seq percent confirming:76.6667
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCGCCTGATCTAGCAT
Suggested primer 2:TGTGTCGAGAAAGGTGACGG