Insertion junction: CLIP2.040033_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040033
Chromosome:chromosome 1
Location:4610038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031850 ACD1 (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED; 1-aminocyclopropane-1-carboxylate deaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCGGGGTTAGGCAGCCGGCGCACAGAGGCGCGGCGGGTCATAGCTAG
Internal bar code:GGTGTCATGGAGCGGGAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3621
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTTGCGCTCGTTGACA
Suggested primer 2:GGCCACACAATCCCTCATGA