Insertion junction: CLIP2.040038_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040038
Chromosome:chromosome 16
Location:4952235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686500 (1 of 1) PF03767 - HAD superfamily, subfamily IIIB (Acid phosphatase) (Acid_phosphat_B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTTTGAGGGGCCGGACTGGAGGCGCCACGGGTGCGGGGAGGGAACT
Internal bar code:GTCCTAGGTGCTTCTCGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGCATGTACTCGAGGTG
Suggested primer 2:GGTACGAGCGAGAAGGTAGC