Insertion junction: CLIP2.040042_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040042
Chromosome:chromosome 14
Location:3013784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627700 (1 of 1) IPR002893//IPR016166 - Zinc finger, MYND-type // FAD-binding, type 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGATGAGCCTGTGCGTGTGGCAGTGGCTGCCGCAGGTCCTGTTCCTGG
Internal bar code:AAACTATTACCGAAAGGCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3342
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGACATCAGGTTCACC
Suggested primer 2:GCTGCTACCATGCCTAGAGG