Insertion junction: CLIP2.040042_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040042
Chromosome:chromosome 14
Location:3013789
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627700 (1 of 1) IPR002893//IPR016166 - Zinc finger, MYND-type // FAD-binding, type 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCTCCGCTGCCGGCGAGTAGGCACTGGGCCGCAGGCATGGGCCGC
Internal bar code:TTCATCGGAAACACGTGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTACCATGCCTAGAGG
Suggested primer 2:CTGGGGACATCAGGTTCACC