Insertion junction: CLIP2.040044_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040044
Chromosome:chromosome 17
Location:4544935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802094 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGCGCCATGGTCTTCTTAAAGTTGTTTTACTGAATGGCAGGAAGAT
Internal bar code:GGCTTCGTATTTAGCAAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3345
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGAGGCTATGCACGGAG
Suggested primer 2:CGCGAGTAAACAATCCGCTG