Insertion junction: CLIP2.040049_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040049
Chromosome:chromosome 17
Location:5736811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740800 (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCACAAGCCTAGGAATGCAGGCCGCTCAAAGCCCGAATGCCATCCGG
Internal bar code:GGGTTGGCCTGCTTCGTACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCAACGCCTACCACAC
Suggested primer 2:CACGACTCTTGGGGGTTCTC