Insertion junction: CLIP2.040049_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040049
Chromosome:chromosome 17
Location:5736822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740800 (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTAACACCGCAGCGCGCGTTGACACGCAAGCAAAGGCAGGCACGGAGG
Internal bar code:TCACAAAGTTTTTCATCAATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACGACTCTTGGGGGTTCTC
Suggested primer 2:TACACCAACGCCTACCACAC