Insertion junction: CLIP2.040055_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040055
Chromosome:chromosome 13
Location:2448471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579598 SSS3B,SSS3 (1 of 2) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED; Soluble starch synthase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACCGTTCTAATAAGTCAGAAGCGGGGTGGCGGTGGTTACCGAAGTCC
Internal bar code:GGATGTCAGAAAGTGACCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTGGAGGGGAGGTTGG
Suggested primer 2:ACAGGATGCACTGAACTGGG