Insertion junction: CLIP2.040063_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040063
Chromosome:chromosome 4
Location:3447170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACACACACATGAACGCACGTGCACACACGCACGTGCACACACGCAC
Internal bar code:TTCTCAATCTATACGAACGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACACAAGTCGTTTGGTGCC
Suggested primer 2:CCAGGCTGTTCTACCCTTGG