Insertion junction: CLIP2.040078_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040078
Chromosome:chromosome 17
Location:5431683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738751 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCTCCGCCGTTTTAGTTGGTTTTGGTTTAGTTTGGGCTGGTATTTAC
Internal bar code:ATATTGAGGGGATTATCTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACATCATCTCCTGGCT
Suggested primer 2:GCAGGTTCATTCGACGATGC