Insertion junction: CLIP2.040081_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040081
Chromosome:chromosome 13
Location:2366282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579100 APC1 (1 of 1) K03348 - anaphase-promoting complex subunit 1 (APC1); Anaphase promoting complex subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCTACGCATGCCGTAGTGCTGTACTACTGTGTCTTGCACATGTGTGC
Internal bar code:CCACTGGTTCATACGGCTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAGGCCTCAAGCATGA
Suggested primer 2:CTCTTTGGAGACGGCCCTG