Insertion junction: CLIP2.040082_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040082
Chromosome:chromosome 11
Location:4008001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480451 PHC42 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGCTCGGCGGCTCCGGGCTTGGCGGCTCCGGGCTTGGCGGCGCCGGG
Internal bar code:GTTTGGGGCCAATATGCCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAACAGTTCGAGACCACG
Suggested primer 2:GCAAAAGGTTGGGCAACGAT