Insertion junction: CLIP2.040093_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040093
Chromosome:chromosome 3
Location:5511589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184900 (1 of 1) IPR027417//IPR029060 - P-loop containing nucleoside triphosphate hydrolase // PIN domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCACACCCTCCATGTCCACCCACGTCCACCGCCCAGTACCGCGCAAG
Internal bar code:CCTGGAGAACTAAATCATCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1822
LEAP-Seq percent confirming:83.6364
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGACTCCGACTTCTACG
Suggested primer 2:ATAGTACATGACCAGCGCGG