Insertion junction: CLIP2.040094_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040094
Chromosome:chromosome 4
Location:1710976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212250 (1 of 82) IPR020846 - Major facilitator superfamily domain; GT77 family protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCGTCCTCACTGGGCGGCGGCTATGGAGACGAGGTCGGGCTGGGCGG
Internal bar code:TTATAGATATGACGTTGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATAGCCATTCATGCGA
Suggested primer 2:TGAGTCCCTGAGTCCCTGAG