Insertion junction: CLIP2.040099_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040099
Chromosome:chromosome 16
Location:7505038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682251 (1 of 1) PF13414//PF14737 - TPR repeat (TPR_11) // Domain of unknown function (DUF4470) (DUF4470) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCTGGATGGGGTCGTTGCCCAGCAGCCGGCAGCGCCGCAGCAGCAG
Internal bar code:GAAGGTGCGCAGATGATGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3488
LEAP-Seq percent confirming:94.0476
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCGGTGTGGTAGCTAGA
Suggested primer 2:CTTTCACTGCTGAGCCCTCA