Insertion junction: CLIP2.040100_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040100
Chromosome:chromosome 2
Location:704995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078000 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTATGTGTGTGTGTGTGTGTGGTCTGCAGGAACCTAACCCTGTCCTC
Internal bar code:GTACAGCACTAGGAGGGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATTTGGAGATGGCGGA
Suggested primer 2:AAGCAGACCATGTACACGGG