Insertion junction: CLIP2.040101_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040101
Chromosome:chromosome 11
Location:629085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGGGGGTGTGTGGTGCTGCGGCGTGCCACCCCGTGTCGCTCCGTGC
Internal bar code:TATATTGTTAAGAGCGCTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTACTGTTGGGAAGCG
Suggested primer 2:CAATCCTTCCCACTTCCCCC