Insertion junction: CLIP2.040115_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040115
Chromosome:chromosome 2
Location:773347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAAGCACGAGCGACACACCCCAGATGGCGCACCTGAGATCCAGGTGG
Internal bar code:CTTCAGAGGTGTAGATTTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5991
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCTAGTGAAGACTCGA
Suggested primer 2:AGGTAGTGCACGTGTTGAGG