Insertion junction: CLIP2.040125_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040125
Chromosome:chromosome 3
Location:2573421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160000 HDA3 (1 of 3) PTHR10625//PTHR10625:SF102 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 10; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTCGCTTGCGTCGCCGGTTCCGGGGTAGTAGGTGCCGTGGTCGTAG
Internal bar code:GGGATACCTGGACGTCGCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGGCTGTTAGGCTGCAT
Suggested primer 2:ACATCGGCACTCATTCCCAG