Insertion junction: CLIP2.040126_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040126
Chromosome:chromosome 7
Location:4176288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342250 PFD2 Prefoldin molecular chaperone, subunit 2; (1 of 1) K09549 - prefoldin subunit 2 (PFDN2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAAAACAGATTGGCGGGCCGTGTTGACGTGCTCAACATGGCGTGGCGA
Internal bar code:AATGGTTCGATGAGTCCCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3435
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCCAGGAAGATGTGCT
Suggested primer 2:GATCCGCCTACGACTTGGAG