Insertion junction: CLIP2.040132_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040132
Chromosome:chromosome 2
Location:6215996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386800 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGGTGAGGTAGAGGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCG
Internal bar code:TTTTTGCCACATCACGGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1250
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGGTGAGGTAGGTCAG
Suggested primer 2:CACACTCACTCACACGCTCT