Insertion junction: CLIP2.040132_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040132
Chromosome:chromosome 2
Location:6216001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386800 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGCGCCGCCGCCGCCGCCGCAGCCAGCGGCGGCAGCCCCCCCGCCG
Internal bar code:TTTTTGCCACATCACGGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:8.57143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTCACTCACACGCTCT
Suggested primer 2:TCGAGGGTGAGGTAGGTCAG