Insertion junction: CLIP2.040140_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040140
Chromosome:chromosome 16
Location:4057170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690400 DNJ5 (1 of 62) PF00226 - DnaJ domain (DnaJ); DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGGGACATTTTGGCGCCACAAGCCAGAGCCTCGCGCGATGTTGGGGC
Internal bar code:GGCTAGCCGTGCACTATTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGATGATGGGCCCTT
Suggested primer 2:AGATAACGCGTCGAAAGCCT