Insertion junction: CLIP2.040141_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040141
Chromosome:chromosome 17
Location:47620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696200 (1 of 1) PTHR15438 - NUCLEAR PORE COMPLEX INTERACTING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGCTGCGATGCGAGAATCCACCCTCTACACGATGAACCGGCCTCTGT
Internal bar code:TTCTCTGGGGGCATCAAGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:26.9231
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGCTCATTTACGCCCGA
Suggested primer 2:TGCTCGCCTGAAACATCCAT