Insertion junction: CLIP2.040146_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040146
Chromosome:chromosome 10
Location:5516024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458050 BCA3 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.21//2.6.1.42 - D-amino-acid transaminase / D-aspartic aminotransferase // Branched-chain-amino-acid transaminase / Transaminase B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCAGATACCTGCGCCGCGCATCCTACCGCGCCACTGCACATCGAGC
Internal bar code:ATCATCACTGAAAGTCACGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTAGCAGGCGAAAAAGG
Suggested primer 2:TTTGCTACGCTTGCCAACAC