Insertion junction: CLIP2.040147_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040147
Chromosome:chromosome 2
Location:2303085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090500 HEL10 (1 of 1) K13131 - ATP-dependent RNA helicase DDX20 (DDX20, GEMIN3); DEAD box ATP-dependent RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTATGGGGGGGGAGGGGATTGCCATTCATGAATTAGTAAAGGAAGTGG
Internal bar code:CCTAGTAATATAGGGGGTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAACTAAAAGCCCGCCC
Suggested primer 2:CACCTGTGTGACGTACGACA