Insertion junction: CLIP2.040156_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040156
Chromosome:chromosome 13
Location:1478105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572350 HSP22G Heat shock protein 22G; (1 of 1) PTHR11527//PTHR11527:SF110 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // 17.4 KDA CLASS I HEAT SHOCK PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAACCATCACGCACGCGCACACACACACGCACACACAGACACACGCA
Internal bar code:GTTAGGGCGCCGCGTCACGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:190
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGTGCATAGCCAACAAG
Suggested primer 2:CCAAACTAACGTTGGCGCAA