Insertion junction: CLIP2.040163_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040163
Chromosome:chromosome 5
Location:1032351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247500 (1 of 2) IPR001841//IPR013083//IPR018957 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, C3HC4 RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGCCTTTTCACCCATCCGCGACACGACCCGCCAGAGCATGCTCACC
Internal bar code:GGATGCACGTCAAATTAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2007
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGCCCGTCCAATTAGG
Suggested primer 2:AGGTGAACAGGTTAGGTGCG