Insertion junction: CLIP2.040165_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040165
Chromosome:chromosome 3
Location:3886134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170601 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTGCTGAGACCCGGGCGGGACCGGGTGGGTCAGCACGAACTTCGCT
Internal bar code:TAAAACCGTCGATTTAGGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4150
LEAP-Seq percent confirming:79.1209
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGAAGCAGGAGGTCTG
Suggested primer 2:AATGGTTCTCTCGCACGGAG